Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_107

Experiment: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 8474 and 8475 are separated by 276 nucleotides8475 and 8476 are separated by 438 nucleotides mRNA_106: 8474 - K15201 GTP3C3, TFC4 general transcription factor 3C polypeptide 3 (transcription factor C subunit 4), at 252,623 to 256,756 8474 mRNA_107: 8475 - K08592 SENP1 sentrin-specific protease 1, at 257,033 to 257,891 8475 mRNA_108: 8476 - Hypothetical Protein, at 258,330 to 258,956 8476

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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256,875 - +0.3
256,885 - +0.8

Or see this region's nucleotide sequence