Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_529

Experiment: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 8897 and 8898 are separated by 606 nucleotides mRNA_529: 8897 - Hypothetical Protein, at 1,262,643 to 1,263,431 8897 mRNA_530: 8898 - Hypothetical Protein, at 1,264,038 to 1,264,727 8898

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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1,263,304 - 8897 mRNA_529 0.84 -0.7
1,263,308 + 8897 mRNA_529 0.84 +0.2
1,263,504 - -0.2
1,263,678 - -0.3
1,263,787 - +0.9

Or see this region's nucleotide sequence