Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_944

Experiment: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 9311 and 9312 are separated by 705 nucleotides mRNA_943: 9311 - K05759 PFN profilin, at 30,809 to 31,667 9311 mRNA_944: 9312 - Hypothetical Protein, at 32,373 to 33,071 9312

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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31,853 + +0.2
32,072 - -0.0
32,527 + 9312 mRNA_944 0.22 -1.9
32,551 - 9312 mRNA_944 0.25 -0.4
32,995 + 9312 mRNA_944 0.89 -0.3
33,531 - +1.5
33,550 - -0.7
33,561 - -0.4
33,599 - -0.2
33,842 + +0.4
34,044 + +2.0

Or see this region's nucleotide sequence