Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_961

Experiment: YNB Methylricinoleic Acid

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 9328 and 9329 are separated by 553 nucleotides9329 and 9330 are separated by 164 nucleotides mRNA_960: 9328 - K20409 WDR59 WD repeat-containing protein 59, at 75,504 to 80,689 9328 mRNA_961: 9329 - Hypothetical Protein, at 81,243 to 82,808 9329 mRNA_962: 9330 - Hypothetical Protein, at 82,973 to 83,563 9330

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
remove
80,290 - -0.3
80,363 - -1.4
80,404 - -0.5
80,427 - +0.7
80,547 + +2.3
80,822 - -0.8
80,984 - +0.6
80,999 + -0.2
81,080 + -1.9
81,904 - 9329 mRNA_961 0.42 -2.4
82,037 - 9329 mRNA_961 0.51 -1.7
82,609 + 9329 mRNA_961 0.87 -3.5
82,898 - -1.9
82,923 + -1.2
83,069 - 9330 mRNA_962 0.16 -0.6
83,202 + 9330 mRNA_962 0.39 -0.2
83,218 + 9330 mRNA_962 0.41 +0.1
83,218 - 9330 mRNA_962 0.41 +0.9
83,225 + 9330 mRNA_962 0.43 -2.8
83,225 + 9330 mRNA_962 0.43 +0.7
83,373 + 9330 mRNA_962 0.68 +1.7
83,388 + 9330 mRNA_962 0.70 -2.2
83,394 + 9330 mRNA_962 0.71 -0.1
83,506 - -0.6
83,515 - -0.1
83,659 + -0.7
83,676 + +0.4
83,678 - -0.1
83,685 + +0.6
83,731 + +1.0
83,733 - +0.2
83,738 + -0.1
83,738 - -1.3
83,741 + +1.0
83,746 - -0.3
83,753 - -0.2
83,753 - +1.1
83,769 + +0.7
83,769 - +0.0
83,769 - +1.5
83,772 - -1.6
83,776 + -1.2
83,806 - -0.5

Or see this region's nucleotide sequence