Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_982

Experiment: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 9350 and 9351 are separated by 456 nucleotides mRNA_982: 9350 - Hypothetical Protein, at 129,189 to 130,203 9350 mRNA_983: 9351 - K02974 RP-S24e, RPS24 small subunit ribosomal protein S24e, at 130,660 to 132,036 9351

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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128,242 + +0.2
128,376 - -2.6
128,389 - -0.1
128,396 + +0.9
128,505 - +1.9
128,689 + -0.6
128,692 - -0.9
128,692 + -1.8
128,699 + -0.8
128,810 - -0.0
128,967 + +0.1
129,103 - +1.6
129,104 - -0.3
129,106 - -0.5
129,117 - +1.5
129,120 - +2.4
129,127 - -0.7
129,250 - -1.2
129,251 - +0.1
129,252 + +0.4
129,253 - -0.5
129,264 - -0.3
129,264 + -0.5
129,274 + -0.5
129,274 - -1.2
129,293 + 9350 mRNA_982 0.10 +1.1
129,421 + 9350 mRNA_982 0.23 +0.5
129,561 - 9350 mRNA_982 0.37 +0.4
129,583 + 9350 mRNA_982 0.39 +0.4
129,867 + 9350 mRNA_982 0.67 +0.4
130,264 - +0.1
130,428 - +1.1
130,446 + -0.2
130,451 + +0.9
130,451 + +0.7
130,588 + -0.3
130,591 + +0.1

Or see this region's nucleotide sequence