Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1107

Experiment: YNB Methylricinoleic Acid

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 9474 and 9475 are separated by 390 nucleotides9475 and 9476 are separated by 272 nucleotides mRNA_1106: 9474 - Hypothetical Protein, at 418,669 to 421,245 9474 mRNA_1107: 9475 - KOG0123 Polyadenylate-binding protein (RRM superfamily), at 421,636 to 422,494 9475 mRNA_1108: 9476 - KOG1134 Uncharacterized conserved protein, at 422,767 to 426,748 9476

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
remove
421,258 - -1.0
421,263 + -1.2
421,401 + +0.5
421,407 + -0.0
421,452 + +0.8
422,400 - 9475 mRNA_1107 0.89 -1.5
422,564 + -0.3
422,568 + -0.3
422,674 + -0.6
422,705 - +0.4
422,753 + -0.8
422,864 + -1.0
422,866 - +1.2
423,016 + -2.3
423,051 + -0.0
423,241 - 9476 mRNA_1108 0.12 +1.8

Or see this region's nucleotide sequence