Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1302

Experiment: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 9669 and 9670 are separated by 296 nucleotides mRNA_1301: 9669 - K06947 GRC3, NOL9 polynucleotide 5'-hydroxyl-kinase GRC3/NOL9, at 864,928 to 866,257 9669 mRNA_1302: 9670 - Hypothetical Protein, at 866,554 to 866,811 9670

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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866,339 + +0.2
866,340 - +0.1
866,364 + +0.4
866,395 + -0.0
866,457 + +0.2
866,657 - 9670 mRNA_1302 0.40 +1.1
866,701 - 9670 mRNA_1302 0.57 +1.2
866,794 + -0.9
866,851 - +1.5
866,859 + -0.3
866,863 - -0.2
866,895 + +0.1
866,900 + -0.1
866,921 + -1.0
866,953 - +1.1
866,954 - +0.4
866,955 - -1.1
866,969 - -1.4
866,969 + +0.7
867,045 + -0.2
867,051 + +0.6
867,052 - -0.1
867,066 - +1.3
867,066 - -0.6
867,070 - +0.1
867,073 - +0.5
867,133 + -0.5
867,133 + -1.0
867,136 - +0.0
867,140 + -0.0
867,143 - +0.9
867,152 + +0.1
867,154 - -0.9
867,160 - +0.6
867,242 - -0.0
867,307 - -0.7
867,321 - +0.4
867,334 - -0.7
867,623 - +0.3
867,643 - +0.2

Or see this region's nucleotide sequence