Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1304

Experiment: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_1304: 9672 - Hypothetical Protein, at 872,936 to 873,714 9672

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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872,719 + +0.1
872,793 - +1.2
872,807 + -0.9
873,213 - 9672 mRNA_1304 0.36 -0.4
873,300 - 9672 mRNA_1304 0.47 -0.4
873,306 + 9672 mRNA_1304 0.47 +2.8
873,339 - 9672 mRNA_1304 0.52 -0.8
873,584 - 9672 mRNA_1304 0.83 +1.1
873,718 - -1.3
873,732 + +1.1
873,838 - -0.6
873,918 - -0.1
874,174 - -0.3
874,175 + -0.5
874,179 + -0.0
874,279 + +0.7
874,630 + -0.2

Or see this region's nucleotide sequence