Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1526

Experiment: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 9893 and 9894 are separated by 387 nucleotides mRNA_1525: 9893 - K08267 RICTOR rapamycin-insensitive companion of mTOR, at 507,359 to 512,878 9893 mRNA_1526: 9894 - K02880 RP-L17e, RPL17 large subunit ribosomal protein L17e, at 513,266 to 514,362 9894

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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513,042 - +2.0
513,043 + -0.9
513,043 + +0.5
513,064 + +0.6
514,528 - +1.0
514,543 - -1.1
514,667 + +0.9
514,698 + +0.4
514,780 - +0.6
514,813 - +0.3
514,989 - +1.4
515,117 + +0.7

Or see this region's nucleotide sequence