Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1618

Experiment: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 9986 and 9987 are separated by 22 nucleotides mRNA_1618: 9986 - Hypothetical Protein, at 734,832 to 736,267 9986 mRNA_1619: 9987 - Hypothetical Protein, at 736,290 to 737,740 9987

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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733,867 + -0.9
734,000 - +0.3
734,139 + +0.5
734,629 - -0.4
735,026 + 9986 mRNA_1618 0.14 -1.5
736,071 + 9986 mRNA_1618 0.86 -0.1
736,348 + +0.1
736,354 + +0.3
736,627 - 9987 mRNA_1619 0.23 -0.6
736,661 - 9987 mRNA_1619 0.26 -2.4
736,692 - 9987 mRNA_1619 0.28 +0.6
737,059 + 9987 mRNA_1619 0.53 -0.3
737,069 + 9987 mRNA_1619 0.54 +0.3
737,082 + 9987 mRNA_1619 0.55 +1.2
737,202 - 9987 mRNA_1619 0.63 +0.5
737,213 - 9987 mRNA_1619 0.64 +1.3

Or see this region's nucleotide sequence