Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1907

Experiment: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_1907: 10275 - Hypothetical Protein, at 487,882 to 489,189 10275

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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487,081 + -0.1
487,155 - +0.9
487,210 - -1.3
487,330 + -0.6
487,473 + +3.5
487,486 + -1.1
487,494 - -0.2
487,494 + +0.1
487,497 + +3.1
487,499 - +0.9
487,508 - -0.1
487,517 + -1.8
487,610 + +0.7
487,777 + -0.2
487,781 - +0.6
487,792 - -0.1
487,801 + -1.5
487,814 - +1.0
487,947 + +1.2
488,388 + 10275 mRNA_1907 0.39 +0.7
489,277 + +0.1
489,279 + +0.1
489,852 - -0.3
490,154 + -1.3

Or see this region's nucleotide sequence