Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2324

Experiment: YNB Ricinoleic Acid

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 10691 and 10692 are separated by 49 nucleotides10692 and 10693 are separated by 379 nucleotides mRNA_2323: 10691 - Hypothetical Protein, at 610,976 to 611,573 10691 mRNA_2324: 10692 - KOG1483 Zn2+ transporter ZNT1 and related Cd2+/Zn2+ transporters (cation diffusion facilitator superfamily), at 611,623 to 612,935 10692 mRNA_2325: 10693 - Hypothetical Protein, at 613,315 to 614,433 10693

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
remove
610,650 + -0.5
610,723 + +0.6
610,756 - +1.1
610,778 - -1.8
610,781 - +0.1
610,881 + -0.0
610,888 - -0.6
610,941 + +0.3
611,083 + 10691 mRNA_2323 0.18 +0.1
611,510 - 10691 mRNA_2323 0.89 +0.0
611,551 - -0.4
611,664 + -0.2
611,812 - 10692 mRNA_2324 0.14 -0.6
612,252 + 10692 mRNA_2324 0.48 -0.1
612,254 + 10692 mRNA_2324 0.48 -0.2
612,709 + 10692 mRNA_2324 0.83 -1.2
612,712 + 10692 mRNA_2324 0.83 -0.8
612,714 + 10692 mRNA_2324 0.83 +0.6
612,854 + -0.6
613,258 - +2.3
613,885 + 10693 mRNA_2325 0.51 -0.2

Or see this region's nucleotide sequence