Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2934

Experiment: YNB Ricinoleic Acid

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 11301 and 11302 are separated by 637 nucleotides11302 and 11303 are separated by 914 nucleotides mRNA_2933: 11301 - Hypothetical Protein, at 583,192 to 584,593 11301 mRNA_2934: 11302 - Hypothetical Protein, at 585,231 to 585,949 11302 mRNA_2935: 11303 - Hypothetical Protein, at 586,864 to 587,457 11303

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
remove
584,862 - -1.3
584,973 + -0.0
584,979 - +0.6
584,997 + -1.8
585,142 + -1.0
585,169 - +2.1
585,177 - +0.2
585,191 + -1.7
585,215 - -0.8
585,216 - +2.3
585,295 - -0.5
585,486 - 11302 mRNA_2934 0.35 +1.4
585,489 + 11302 mRNA_2934 0.36 -0.9
585,623 + 11302 mRNA_2934 0.55 +0.5
585,880 + +0.2
586,336 - -0.5
586,357 - +0.8
586,366 + +0.4
586,564 + -0.4
586,692 + +1.3
586,785 + +0.8
586,787 + -0.8

Or see this region's nucleotide sequence