Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3690

Experiment: YNB Ricinoleic Acid

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 12057 and 12058 are separated by 498 nucleotides mRNA_3689: 12057 - Hypothetical Protein, at 354,043 to 355,679 12057 mRNA_3690: 12058 - BLAST Ser/Thr protein kinase [Mucor ambiguus], at 356,178 to 360,570 12058

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
remove
355,647 + -0.8
355,823 + -2.2
356,086 + -0.6
356,111 - +0.5
356,547 + +1.5
357,398 - 12058 mRNA_3690 0.28 +0.7
357,435 - 12058 mRNA_3690 0.29 +1.5
358,450 - 12058 mRNA_3690 0.52 -0.5
359,766 - 12058 mRNA_3690 0.82 -1.2
359,893 - 12058 mRNA_3690 0.85 +0.1
359,927 - 12058 mRNA_3690 0.85 -0.0
360,372 + -0.3
360,770 - -0.5
360,793 - -0.6
360,804 - -1.5
361,091 - -1.6
361,118 + -0.2
361,123 + -0.7
361,124 + -0.6

Or see this region's nucleotide sequence