Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4135

Experiment: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_4135: 12503 - Hypothetical Protein, at 1,436,096 to 1,437,124 12503

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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1,435,096 - +0.3
1,435,108 + -0.4
1,435,118 + +0.7
1,435,260 - -0.8
1,435,263 - +1.3
1,435,270 + -0.0
1,435,277 + +0.4
1,435,282 - -0.5
1,435,292 + +0.0
1,435,434 - -0.8
1,435,538 + -0.2
1,435,856 - +0.5
1,435,990 + +1.4
1,436,600 + 12503 mRNA_4135 0.49 -1.6
1,437,035 + +0.7
1,437,318 - -0.9
1,437,322 - -0.9
1,437,783 - +0.4

Or see this region's nucleotide sequence