Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4612

Experiment: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_4612: 12980 - KOG0001 Ubiquitin and ubiquitin-like proteins, at 594,081 to 594,633 12980

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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593,194 + -0.1
593,362 - +0.1
594,339 - 12980 mRNA_4612 0.47 -1.1
594,824 - -0.2
595,084 + -0.7

Or see this region's nucleotide sequence