Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4724

Experiment: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 13091 and 13092 are separated by 220 nucleotides mRNA_4723: 13091 - Hypothetical Protein, at 861,099 to 862,312 13091 mRNA_4724: 13092 - Hypothetical Protein, at 862,533 to 863,753 13092

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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862,525 - -1.4
862,548 + +0.3
862,650 - -0.2
862,687 + 13092 mRNA_4724 0.13 +1.6
862,991 + 13092 mRNA_4724 0.38 +0.2
863,325 - 13092 mRNA_4724 0.65 -1.3
863,533 - 13092 mRNA_4724 0.82 -0.1
863,697 + +0.5
863,761 - +0.3
863,866 - +1.3
864,246 - -0.2
864,246 - -0.5
864,254 - +0.7
864,264 + +1.2
864,523 - +0.5
864,696 - +0.1
864,714 + -1.3
864,743 + +0.0

Or see this region's nucleotide sequence