Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4833

Experiment: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 13200 and 13201 are separated by 190 nucleotides13201 and 13202 are separated by 295 nucleotides mRNA_4832: 13200 - KOG4168 Predicted RNA polymerase III subunit C17, at 1,109,759 to 1,110,628 13200 mRNA_4833: 13201 - K05755 ARPC4 actin related protein 2/3 complex, subunit 4, at 1,110,819 to 1,111,714 13201 mRNA_4834: 13202 - K02996 RP-S9, MRPS9, rpsI small subunit ribosomal protein S9, at 1,112,010 to 1,113,278 13202

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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1,110,699 - +0.8
1,111,855 - -0.2

Or see this region's nucleotide sequence