Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4873

Experiment: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 13241 and 13242 are separated by 797 nucleotides mRNA_4873: 13241 - K09205 KLF8_12 krueppel-like factor 8/12, at 1,191,308 to 1,191,654 13241 mRNA_4874: 13242 - KOG2922 Uncharacterized conserved protein, at 1,192,452 to 1,195,364 13242

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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1,190,313 + +1.0
1,190,396 + +0.3
1,190,746 - -0.7
1,191,170 - +0.7
1,191,195 + +0.5
1,191,902 + +2.6
1,191,925 - +0.3
1,192,019 + -0.1
1,192,089 - -0.4
1,192,094 + -0.5
1,192,208 - -0.7
1,192,211 - +0.9
1,192,236 - -0.1
1,192,238 + -0.4
1,192,246 - -0.7
1,192,357 - -0.6
1,192,377 + +0.5
1,192,520 + +0.1
1,192,531 - +0.7

Or see this region's nucleotide sequence