Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5185

Experiment: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_5185: 13553 - K01210 E3.2.1.58 glucan 1,3-beta-glucosidase, at 97,438 to 100,447 13553

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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96,449 + -2.1
96,585 + +0.1
96,586 + -0.4
96,601 - -0.8
96,603 + +0.1
96,606 + -1.7
96,610 + -2.3
96,702 - -2.5
96,730 - +1.4
96,732 - -2.0
96,734 - -2.2
96,736 - -0.1
96,751 + -0.9
96,757 + +0.5
96,761 - -0.2
96,765 + -1.4
96,779 - -4.4
96,784 - -2.2
96,787 + -4.4
96,792 - -0.3
96,820 + +0.3
96,896 + -3.1
96,914 + -0.8
96,932 - +0.7
100,504 - +0.9
100,635 + -0.5
100,646 - +0.4
100,687 + -1.1
100,731 - +0.1
100,845 - +0.4
100,851 - +1.1
100,855 - +0.9
101,137 - -0.2

Or see this region's nucleotide sequence