Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5785

Experiment: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 14153 and 14154 are separated by 470 nucleotides mRNA_5785: 14153 - K14758 HRR25 casein kinase I homolog HRR25, at 937,212 to 938,671 14153 mRNA_5786: 14154 - Hypothetical Protein, at 939,142 to 939,826 14154

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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936,326 + +0.5
936,604 - +3.8
936,612 - +0.9
936,623 - +0.4
936,626 + +0.8
936,628 - +1.8
936,632 - +0.7
936,643 + +0.6
936,649 + +1.4
936,766 + +0.6
936,926 + -0.5
936,975 + -1.7
937,091 + +1.0
937,103 - -2.3
937,120 + +0.7
938,912 - +0.8
938,978 - +0.2
938,995 - +0.2
939,129 + -0.1

Or see this region's nucleotide sequence