Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6274

Experiment: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 14642 and 14643 are separated by 360 nucleotides mRNA_6274: 14642 - Hypothetical Protein, at 418,088 to 419,666 14642 mRNA_6275: 14643 - BLAST secreted protein [Melampsora larici-populina 98AG31], at 420,027 to 422,108 14643

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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417,105 + -3.8
417,110 - +0.4
417,128 + +0.5
417,260 + -0.4
417,541 - -1.0
418,450 - 14642 mRNA_6274 0.23 +0.5
419,284 - 14642 mRNA_6274 0.76 +0.0
419,395 - 14642 mRNA_6274 0.83 +0.4
419,542 - +2.1
419,699 - +0.5
419,864 - +0.6
419,868 - +0.5
420,010 - -0.2
420,015 - -0.2
420,496 + 14643 mRNA_6275 0.23 -1.2

Or see this region's nucleotide sequence