Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6350

Experiment: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 14717 and 14718 are separated by 575 nucleotides mRNA_6349: 14717 - BLAST NADH dehydrogenase [ubiquinone] 1 beta subcomplex..., at 607,266 to 607,793 14717 mRNA_6350: 14718 - K01749 hemC, HMBS hydroxymethylbilane synthase, at 608,369 to 610,484 14718

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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608,075 - -0.3
608,086 - -1.0
608,122 + +0.0
608,123 + -0.0
608,139 + -0.3
608,297 - -2.0
610,455 + -2.1
610,617 + -0.4
610,726 + -1.6
610,905 + -0.5
610,935 - -0.7

Or see this region's nucleotide sequence