Experiment: YNB Ricinoleic Acid
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertions' strand.
Conventionally, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt
15519 and 15520 are separated by 700 nucleotides 15520 and 15521 are separated by 384 nucleotides
mRNA_7151: 15519 - BLAST putative transmembrane protein [Rhizoctonia solani 123E], at 1,001,507 to 1,002,023
15519
mRNA_7152: 15520 - Hypothetical Protein, at 1,002,724 to 1,003,659
15520
mRNA_7153: 15521 - Hypothetical Protein, at 1,004,044 to 1,005,448
15521
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Per-strain Table Position Strand Gene Sysname Fraction YNB Ricinoleic Acid remove 1,002,232 + +1.1 1,002,645 - -1.2 1,002,824 - 15520 mRNA_7152 0.11 -0.7 1,002,929 - 15520 mRNA_7152 0.22 -0.3 1,002,964 + 15520 mRNA_7152 0.26 -0.1 1,003,251 - 15520 mRNA_7152 0.56 -0.2 1,003,419 - 15520 mRNA_7152 0.74 +2.1 1,003,614 - -0.2 1,003,645 - +2.0 1,003,681 - -0.6 1,003,684 + -0.6 1,003,695 + +2.3 1,003,697 + +1.3 1,003,716 + -0.6 1,003,738 - +1.3 1,003,743 - -0.3 1,003,822 + -0.2 1,003,829 + -1.9 1,003,843 - +1.7 1,003,845 - +1.0 1,003,845 - +0.5 1,003,864 + -0.1 1,003,868 - -0.2 1,003,878 + -0.6 1,003,883 + +0.8 1,003,886 + -0.1 1,003,893 - -0.3 1,004,023 - -0.5 1,004,031 - +2.2 1,004,035 + +0.5 1,004,044 + +1.7 1,004,162 + +0.1 1,004,174 - +0.9 1,004,174 - +1.8 1,004,181 + +1.5 1,004,183 - +0.8 1,004,193 - 15521 mRNA_7153 0.11 +1.3 1,004,312 - 15521 mRNA_7153 0.19 -2.5 1,004,331 + 15521 mRNA_7153 0.20 -0.1 1,004,347 + 15521 mRNA_7153 0.22 +0.2 1,004,475 + 15521 mRNA_7153 0.31 +0.7 1,004,498 - 15521 mRNA_7153 0.32 +0.8 1,004,506 + 15521 mRNA_7153 0.33 +0.4 1,004,637 - 15521 mRNA_7153 0.42 +0.3 1,004,659 + 15521 mRNA_7153 0.44 +0.3
Or see this region's nucleotide sequence