Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7350

Experiment: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15717 and 15718 are separated by 504 nucleotides mRNA_7349: 15717 - K07207 TSC2 tuberous sclerosis 2, at 64,019 to 67,525 15717 mRNA_7350: 15718 - Hypothetical Protein, at 68,030 to 70,360 15718

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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69,942 - 15718 mRNA_7350 0.82 +2.8
69,992 - 15718 mRNA_7350 0.84 -1.6
70,634 - +0.2
70,653 + +0.3
70,788 - -0.1
70,792 - -0.4
70,807 + +0.1
70,830 + +0.1
70,908 + +0.8
70,954 - +1.6
71,079 - -0.1
71,089 - -0.8
71,094 - +0.6
71,097 - -2.0
71,101 + +1.0
71,108 - +0.3
71,121 + +0.6

Or see this region's nucleotide sequence