Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7360

Experiment: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15728 and 15729 are separated by 430 nucleotides mRNA_7360: 15728 - Hypothetical Protein, at 90,512 to 91,159 15728 mRNA_7361: 15729 - K14685 SLC40A1, FPN1 solute carrier family 40 (iron-regulated transporter), member 1, at 91,590 to 93,600 15729

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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91,027 - 15728 mRNA_7360 0.79 +2.0
91,035 - 15728 mRNA_7360 0.81 +2.2
91,215 + -0.5
91,478 + -0.4
91,480 - +0.9
91,505 - -0.6
91,635 - +1.1
91,646 - +0.1
91,647 - +0.8
91,648 + +0.4
91,779 - +1.2
91,781 - +0.4
91,838 - 15729 mRNA_7361 0.12 -0.6
91,954 - 15729 mRNA_7361 0.18 +0.8
92,090 - 15729 mRNA_7361 0.25 -0.1

Or see this region's nucleotide sequence