Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7459

Experiment: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15827 and 15828 are separated by 341 nucleotides mRNA_7459: 15827 - K10997 TOF1, SWI1 replication fork protection complex subunit Tof1/Swi1, at 322,398 to 327,166 15827 mRNA_7460: 15828 - K00698 CHS1 chitin synthase, at 327,508 to 332,421 15828

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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321,452 + -0.0
321,453 + -0.6
321,463 - +0.4
321,465 + -0.2
321,482 + -0.8
321,602 - +0.7
321,889 - -1.1
321,926 + +1.0
322,046 + -1.1
322,047 + +1.3
322,179 + +0.3
322,309 - -1.1
322,339 + -1.4
325,564 + 15827 mRNA_7459 0.66 -0.6
326,952 + -1.1
327,014 - +1.4
327,260 - +0.3
327,450 - -0.3
327,546 + -1.9
327,577 + +0.1
327,917 + -0.6

Or see this region's nucleotide sequence