Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7641

Experiment: YNB Ricinoleic Acid

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 16008 and 16009 are separated by 250 nucleotides16009 and 16010 are separated by 192 nucleotides mRNA_7640: 16008 - K12622 LSM3 U6 snRNA-associated Sm-like protein LSm3, at 746,033 to 746,457 16008 mRNA_7641: 16009 - Hypothetical Protein, at 746,708 to 747,858 16009 mRNA_7642: 16010 - K06943 NOG1 nucleolar GTP-binding protein, at 748,051 to 750,365 16010

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
remove
746,688 - +0.1
746,707 - +0.5
746,951 - 16009 mRNA_7641 0.21 -0.4
747,167 - 16009 mRNA_7641 0.40 -0.7
747,404 + 16009 mRNA_7641 0.60 -1.6
747,445 - 16009 mRNA_7641 0.64 +0.4
747,574 - 16009 mRNA_7641 0.75 -0.4
747,600 + 16009 mRNA_7641 0.77 +0.8
747,607 - 16009 mRNA_7641 0.78 +0.3
747,882 - -0.9
747,887 + -1.3
747,904 - -1.0
747,904 - +0.7
747,932 + +0.2
748,181 - +2.3

Or see this region's nucleotide sequence