Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7731

Experiment: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 16099 and 16100 are separated by 812 nucleotides mRNA_7731: 16099 - Hypothetical Protein, at 947,263 to 948,324 16099 mRNA_7732: 16100 - Hypothetical Protein, at 949,137 to 950,100 16100

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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946,389 + +0.7
946,432 + +1.1
946,482 - -0.6
946,546 + -0.6
946,573 + -1.6
946,670 - +1.1
946,712 + -0.8
946,860 - +1.0
946,996 - -0.7
946,999 - +0.1
947,005 - +1.2
947,026 - +0.3
947,095 + -1.9
947,306 + +0.6
947,316 + +2.1
948,054 - 16099 mRNA_7731 0.74 +0.9
948,320 - +0.3
948,329 + +0.8
948,419 + -0.7
948,436 - +0.6
948,495 - +0.3
948,788 + -1.3

Or see this region's nucleotide sequence