Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7753

Experiment: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 16120 and 16121 are separated by 94 nucleotides16121 and 16122 are separated by 854 nucleotides mRNA_7752: 16120 - Hypothetical Protein, at 984,642 to 987,561 16120 mRNA_7753: 16121 - Hypothetical Protein, at 987,656 to 988,786 16121 mRNA_7754: 16122 - Hypothetical Protein, at 989,641 to 993,184 16122

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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988,841 + +0.4
988,959 - -1.5
989,020 + +0.1
989,104 + -0.8
989,106 + +0.9
989,107 - +1.6
989,148 - +0.6
989,151 + -0.1
989,173 + +1.4
989,294 + -0.2
989,296 + +0.0
989,309 + -1.7
989,462 - -0.1
989,474 + +0.6
989,734 - -0.9
989,740 + +0.9

Or see this region's nucleotide sequence