Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7844

Experiment: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 16211 and 16212 are separated by 342 nucleotides mRNA_7843: 16211 - BLAST alpha- -glucan [Moniliophthora roreri MCA 2997], at 1,195,888 to 1,196,592 16211 mRNA_7844: 16212 - K02966 RP-S19e, RPS19 small subunit ribosomal protein S19e, at 1,196,935 to 1,198,284 16212

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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1,196,691 + +1.2
1,196,774 - -0.7
1,196,774 - +0.8
1,198,620 - +0.6
1,198,620 + -1.0
1,198,638 - +1.1
1,198,660 + -1.5
1,198,792 - +0.5
1,199,030 - -0.2
1,199,074 - -1.4
1,199,085 - -0.6

Or see this region's nucleotide sequence