Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8099

Experiment: YNB Ricinoleic Acid

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 16466 and 16467 are separated by 664 nucleotides16467 and 16468 are separated by 903 nucleotides mRNA_8098: 16466 - Hypothetical Protein, at 415,217 to 416,223 16466 mRNA_8099: 16467 - HMMPfam-SUR7/PalI family-PF06687, at 416,888 to 417,757 16467 mRNA_8100: 16468 - BLAST DigA protein [Rhizoctonia solani AG-3 Rhs1AP], at 418,661 to 419,532 16468

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
remove
415,936 - 16466 mRNA_8098 0.71 -0.7
416,125 + -2.1
416,323 - -0.9
416,324 + -0.7
416,337 - +0.6
416,402 + -1.7
416,414 + -1.6
416,426 + -0.6
416,454 - +0.5
416,509 + -0.0
416,511 - +0.5
416,531 - -0.0
416,543 - +0.7
416,562 - -0.2
416,563 - -0.6
416,568 + -1.4
416,576 + +2.3
416,578 - -0.8
416,591 + -0.2
416,700 + -0.9
416,702 - -0.1
416,718 - +0.8
416,862 + -1.5
416,875 - +0.3
417,005 + 16467 mRNA_8099 0.13 +0.4
417,293 - 16467 mRNA_8099 0.47 -2.2
417,487 - 16467 mRNA_8099 0.69 -0.1
418,229 + +0.4
418,392 - +0.0

Or see this region's nucleotide sequence