Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8115

Experiment: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 16482 and 16483 are separated by 410 nucleotides16483 and 16484 are separated by 336 nucleotides mRNA_8114: 16482 - K09648 IMP2 mitochondrial inner membrane protease subunit 2, at 451,409 to 451,898 16482 mRNA_8115: 16483 - K03868 RBX1, ROC1 RING-box protein 1, at 452,309 to 453,227 16483 mRNA_8116: 16484 - K00949 thiN, TPK1, THI80 thiamine pyrophosphokinase, at 453,564 to 454,690 16484

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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452,116 + -0.2
452,240 + +0.6
452,258 - -0.4
452,258 - -1.3
453,276 - -1.0
453,412 - -0.1
453,573 - -2.0

Or see this region's nucleotide sequence