Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8386

Experiment: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_8386: 16754 - K02868 RP-L11e, RPL11 large subunit ribosomal protein L11e, at 1,090,246 to 1,091,683 16754

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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1,089,579 - +0.7
1,089,594 + +1.2
1,089,605 + +0.3
1,089,621 - -1.7
1,089,629 - -1.1
1,089,736 - +0.3
1,089,738 - -1.7
1,089,738 - +1.1
1,089,757 + -0.6
1,089,893 - -1.5
1,092,138 - -0.1
1,092,277 - +0.0
1,092,302 - -2.2
1,092,442 + -0.3

Or see this region's nucleotide sequence