Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_302

Experiment: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 8670 and 8671 are separated by 717 nucleotides mRNA_302: 8670 - K00668 FAS1 fatty acid synthase subunit beta, fungi type, at 717,137 to 721,125 8670 mRNA_303: 8671 - K00222 TM7SF2, ERG24 Delta14-sterol reductase, at 721,843 to 723,815 8671

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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716,228 - +0.4
716,231 - -1.6
716,246 - -0.5
716,429 - -1.3
716,505 - -2.5
716,551 - +2.0
716,553 - -0.4
716,559 - -0.6
716,569 + -0.2
716,701 + -0.6
721,486 - -1.4
721,618 - +0.1
721,780 - -1.3
721,783 + +0.7
721,783 + +2.3

Or see this region's nucleotide sequence