Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_782

Experiment: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 9149 and 9150 are separated by 551 nucleotides mRNA_781: 9149 - K02910 RP-L31e, RPL31 large subunit ribosomal protein L31e, at 1,860,741 to 1,861,371 9149 mRNA_782: 9150 - K02917 RP-L35Ae, RPL35A large subunit ribosomal protein L35Ae, at 1,861,923 to 1,862,958 9150

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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1,861,688 - +1.0
1,861,690 + +1.4
1,863,023 + -0.6
1,863,293 - +0.5
1,863,494 + +0.2
1,863,760 - -0.8
1,863,763 - -0.4
1,863,766 - +2.0
1,863,921 - -0.3
1,863,929 + -0.8
1,863,940 + -1.2

Or see this region's nucleotide sequence