Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_968

Experiment: YNB Ricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_968: 9336 - KOG0970 DNA polymerase alpha, catalytic subunit, at 97,050 to 97,673 9336

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
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96,072 - -0.4
96,074 - -0.0
96,090 + -0.9
96,189 - -0.9
96,203 - -0.6
96,217 - -0.9
96,225 - -0.3
96,225 - -0.2
96,230 + -1.1
96,256 + -0.3
96,381 + -0.4
96,383 + -0.7
96,387 + +0.8
96,504 - +2.1
96,530 + -0.3
96,547 - +0.1
96,549 - -0.2
96,560 + -0.1
96,649 + -0.8
96,650 + -0.1
96,657 + -0.2
96,659 - +0.9
96,698 - -0.2
96,791 - -0.3
96,919 - +0.6
97,110 + -1.4
97,252 - 9336 mRNA_968 0.32 +1.3
97,388 + 9336 mRNA_968 0.54 +0.3
97,514 + 9336 mRNA_968 0.74 +1.3
97,669 - +0.2
98,248 - +0.6
98,385 - -0.9
98,410 + +0.7

Or see this region's nucleotide sequence