Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1319

Experiment: YNB Ricinoleic Acid

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 9686 and 9687 are separated by 539 nucleotides mRNA_1318: 9686 - KOG1773 Stress responsive protein, at 917,910 to 918,381 9686 mRNA_1319: 9687 - KOG0404 Thioredoxin reductase, at 918,921 to 919,455 9687

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Ricinoleic Acid
remove
918,382 - -0.2
918,522 - -0.8
918,531 + +1.4
919,396 + 9687 mRNA_1319 0.89 -1.4
919,572 + +0.4
919,590 + +0.8
919,613 - +0.4
919,637 + -0.4
919,876 - -0.7
919,888 - -0.7
920,177 - -0.7
920,259 + +0.0
920,261 - +3.2
920,301 - +0.1
920,339 + +0.6

Or see this region's nucleotide sequence