Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2031

Experiment: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_2031: 10399 - BLAST TPR-like protein [Auricularia subglabra TFB-10046..., at 792,632 to 792,952 10399

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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791,657 + +0.1
791,835 - +1.4
792,124 + +0.8
792,668 + 10399 mRNA_2031 0.11 +0.1
793,010 - +1.6
793,160 - +0.1
793,320 + -0.6
793,561 + +1.1
793,576 - -0.5
793,619 + +1.6

Or see this region's nucleotide sequence