Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2757

Experiment: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 11125 and 11126 are separated by 267 nucleotides mRNA_2757: 11125 - Hypothetical Protein, at 149,493 to 150,603 11125 mRNA_2758: 11126 - Hypothetical Protein, at 150,871 to 152,585 11126

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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148,785 + +0.2
148,816 + +0.3
148,868 - +1.4
149,308 + +1.6
149,518 + -0.5
149,539 - +0.7
150,073 - 11125 mRNA_2757 0.52 -0.4
150,389 + 11125 mRNA_2757 0.81 -2.0
150,810 - -0.0
150,823 - +1.9
150,946 + -0.4
150,954 - +1.4
150,960 - -0.3
150,966 + +0.0
150,993 + -0.0
151,254 - 11126 mRNA_2758 0.22 +0.0
151,260 + 11126 mRNA_2758 0.23 +1.2
151,278 + 11126 mRNA_2758 0.24 +0.7
151,406 + 11126 mRNA_2758 0.31 -0.3
151,407 - 11126 mRNA_2758 0.31 +0.7

Or see this region's nucleotide sequence