Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2915

Experiment: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_2915: 11283 - Hypothetical Protein, at 533,180 to 533,383 11283

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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532,195 - +0.6
532,217 + -1.5
532,394 - -0.6
532,394 + -1.3
532,403 - +1.0
532,408 - -0.9
532,542 - +0.1
532,557 + -1.2
532,570 + -0.2
532,626 - +0.2
532,644 + +1.4
532,663 + +1.5
532,687 - -0.7
532,689 + +0.4
532,695 - +1.4
532,699 + +0.8
532,705 + -0.3
532,767 + -0.2
532,827 + +1.6
532,828 - -1.0
532,951 + -0.7
532,953 - -1.1
532,999 + -0.6
533,001 + +0.7
533,025 - -0.8
533,076 - +1.4
533,076 + +1.7
533,084 + +0.2
533,088 + +0.3
533,091 + -0.0
533,117 - +0.4
533,142 + +0.2
533,253 - 11283 mRNA_2915 0.36 +1.3
533,254 - 11283 mRNA_2915 0.36 +1.3
533,304 + 11283 mRNA_2915 0.61 +0.6
533,408 - +0.8
533,416 - +0.3
533,459 + +1.3
533,580 - +0.4
533,581 - +1.0
533,594 - +0.9
533,595 - +1.2
533,620 + +1.1
533,742 - -0.3
533,938 + -0.1
534,073 + +0.6
534,201 + +1.3
534,210 - +0.3
534,214 + +0.5
534,219 - -0.6
534,220 + +0.7
534,224 + -0.4
534,362 - +1.6
534,364 - -0.3
534,379 + +0.2

Or see this region's nucleotide sequence