Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3517

Experiment: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 11884 and 11885 are separated by 202 nucleotides11885 and 11886 are separated by 64 nucleotides mRNA_3516: 11884 - K01466 allB allantoinase, at 288,576 to 290,377 11884 mRNA_3517: 11885 - K06677 YCS4, CNAP1, CAPD2 condensin complex subunit 1, at 290,580 to 295,754 11885 mRNA_3518: 11886 - K12275 SEC62 translocation protein SEC62, at 295,819 to 296,849 11886

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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290,066 + 11884 mRNA_3516 0.83 +2.1
290,640 + +2.3

Or see this region's nucleotide sequence