Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3579

Experiment: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 11946 and 11947 are separated by 150 nucleotides mRNA_3578: 11946 - HMMPfam-Glutathione-dependent formaldehyde-activating enzyme-PF04828,SUPERFAMILY--SSF51316, at 92,960 to 93,719 11946 mRNA_3579: 11947 - K16570 TUBGCP3, GCP3 gamma-tubulin complex component 3, at 93,870 to 96,029 11947

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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92,875 + +0.5
92,876 + +0.8
92,876 + +0.3
92,879 + +0.6
92,879 + -0.1
92,886 - +1.0
93,831 + +0.6
93,919 - -1.0
96,657 + +0.7
96,941 - +1.1

Or see this region's nucleotide sequence