Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5386

Experiment: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 13753 and 13754 are separated by 38 nucleotides mRNA_5385: 13753 - Hypothetical Protein, at 619,262 to 620,433 13753 mRNA_5386: 13754 - Hypothetical Protein, at 620,472 to 621,845 13754

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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619,474 - 13753 mRNA_5385 0.18 -0.1
619,503 + 13753 mRNA_5385 0.21 +0.3
619,905 + 13753 mRNA_5385 0.55 +0.3
619,908 - 13753 mRNA_5385 0.55 +0.3
619,912 - 13753 mRNA_5385 0.55 +1.5
619,934 - 13753 mRNA_5385 0.57 -0.5
620,082 - 13753 mRNA_5385 0.70 +0.4
620,085 + 13753 mRNA_5385 0.70 +2.1
620,085 + 13753 mRNA_5385 0.70 -0.4
620,913 - 13754 mRNA_5386 0.32 +0.2
621,001 - 13754 mRNA_5386 0.39 +0.3
621,264 + 13754 mRNA_5386 0.58 +1.5
621,544 - 13754 mRNA_5386 0.78 +0.4
621,608 + 13754 mRNA_5386 0.83 +0.5
621,756 - -0.4
621,771 - +1.8
622,077 + -0.5
622,119 - -1.2
622,312 - +0.3
622,331 - -0.0
622,341 - -0.7

Or see this region's nucleotide sequence