Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5392

Experiment: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt mRNA_5392: 13760 - KOG0166 Karyopherin (importin) alpha, at 636,605 to 638,927 13760

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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635,630 + -0.2
635,664 + -0.8
635,844 + +0.4
636,119 - -0.7
636,216 + -0.5
636,241 + +0.5
636,371 + +0.9
636,386 + +0.4
636,393 + -0.0
636,414 + +0.5
636,532 - -0.3
636,535 - -0.1
636,536 + -2.8
636,560 - -0.5
636,561 + +0.7
636,580 + -0.3
639,035 - -1.8
639,359 + -0.8
639,481 - -1.3
639,654 + -1.4
639,778 - +0.8
639,809 + +0.3
639,844 - -1.1
639,889 - -0.2
639,922 + -1.4

Or see this region's nucleotide sequence