Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6300

Experiment: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 14667 and 14668 are separated by 24 nucleotides14668 and 14669 are separated by 899 nucleotides mRNA_6299: 14667 - K14574 SDO1, SBDS ribosome maturation protein SDO1, at 473,902 to 475,228 14667 mRNA_6300: 14668 - Hypothetical Protein, at 475,253 to 476,197 14668 mRNA_6301: 14669 - Hypothetical Protein, at 477,097 to 477,785 14669

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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475,569 + 14668 mRNA_6300 0.33 +0.1
475,582 - 14668 mRNA_6300 0.35 +0.1
476,090 + 14668 mRNA_6300 0.89 -0.6
476,593 - -0.1
476,838 - -0.1
476,956 - +1.7
477,094 - -0.3
477,140 + +0.1

Or see this region's nucleotide sequence