Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6410

Experiment: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 14777 and 14778 are separated by 641 nucleotides mRNA_6409: 14777 - KOG2806 Chitinase, at 741,880 to 743,909 14777 mRNA_6410: 14778 - HMMPfam-Peptidase inhibitor I9-PF05922,SUPERFAMILY--SSF54897, at 744,551 to 744,938 14778

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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743,594 + 14777 mRNA_6409 0.84 -1.1
743,864 + -0.7
743,964 + -0.1
744,429 - +0.3
744,536 + +0.8
744,559 - +0.9
744,572 - -0.4
744,572 - +0.0
744,728 + 14778 mRNA_6410 0.46 -0.0
744,855 - 14778 mRNA_6410 0.78 +0.0
744,868 - 14778 mRNA_6410 0.82 +1.3
744,989 - -0.0
744,997 - -0.2
745,000 + +1.1
745,002 - +0.1
745,006 + +1.0
745,008 + +2.6
745,008 - -1.8
745,015 + +0.4
745,022 - +0.4
745,029 + +1.0
745,029 - +1.2
745,036 - +1.1
745,041 - +0.8
745,071 - -0.6
745,168 + -1.0
745,204 + +1.8
745,450 - +1.4
745,617 - +0.9
745,888 - +0.5
745,893 - +0.5
745,907 - +2.4
745,908 - -0.5
745,909 + -0.1
745,922 - +0.0
745,922 - +0.1

Or see this region's nucleotide sequence