Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6717

Experiment: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15084 and 15085 are separated by 415 nucleotides mRNA_6716: 15084 - Hypothetical Protein, at 1,523,143 to 1,524,181 15084 mRNA_6717: 15085 - Hypothetical Protein, at 1,524,597 to 1,524,959 15085

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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1,524,244 + -1.1
1,524,320 - +0.4
1,524,338 + +1.0
1,524,406 - +1.1
1,524,986 - -0.1
1,524,986 - +1.8
1,525,010 - -0.1
1,525,268 - -0.4
1,525,772 - +0.2
1,525,794 - +0.2
1,525,865 + +0.2
1,525,896 - +0.4

Or see this region's nucleotide sequence