Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6763

Experiment: YNB Glucose

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15130 and 15131 are separated by 757 nucleotides mRNA_6762: 15130 - K02942 RP-LP1, RPLP1 large subunit ribosomal protein LP1, at 80,417 to 80,968 15130 mRNA_6763: 15131 - K11584 PPP2R5 serine/threonine-protein phosphatase 2A regulatory subunit B', at 81,726 to 84,068 15131

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
remove
81,380 + -0.1
81,386 + +0.3
81,541 + -0.8
81,561 + +1.2
81,572 + -0.7
81,694 + +1.5
81,703 + +0.2
81,997 + 15131 mRNA_6763 0.12 +0.0
82,124 - 15131 mRNA_6763 0.17 +1.8
82,126 - 15131 mRNA_6763 0.17 +1.4
82,150 + 15131 mRNA_6763 0.18 +1.8
82,302 - 15131 mRNA_6763 0.25 +1.6
82,305 + 15131 mRNA_6763 0.25 +1.9
82,308 + 15131 mRNA_6763 0.25 +1.5
82,321 - 15131 mRNA_6763 0.25 -0.1
82,420 - 15131 mRNA_6763 0.30 -0.8
82,581 - 15131 mRNA_6763 0.36 +1.1
84,618 - +1.0
84,795 - -0.5
84,797 + +0.5
84,950 + -0.1
84,957 - +0.0
84,971 - +0.2

Or see this region's nucleotide sequence