Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7233

Experiment: YNB Glucose

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertions' strand. Conventionally, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

500 nt 15600 and 15601 are separated by 107 nucleotides15601 and 15602 are separated by 171 nucleotides mRNA_7232: 15600 - K10572 IPPK inositol-pentakisphosphate 2-kinase, at 1,186,072 to 1,187,585 15600 mRNA_7233: 15601 - Hypothetical Protein, at 1,187,693 to 1,188,676 15601 mRNA_7234: 15602 - HMMPfam-Mitochondrial ribosomal protein subunit-PF11709, at 1,188,848 to 1,190,629 15602

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
remove
1,187,574 + -0.3
1,187,583 - -0.0
1,187,714 + -0.1
1,187,726 - +1.1
1,187,993 - 15601 mRNA_7233 0.30 -0.1
1,188,424 - 15601 mRNA_7233 0.74 -1.1
1,188,432 + 15601 mRNA_7233 0.75 +0.6
1,188,581 - -0.1
1,188,585 - +0.2
1,188,585 - -0.8
1,188,600 + +0.8
1,188,605 + +0.8
1,188,635 + -0.6
1,188,689 + +1.2
1,188,725 - +0.3
1,188,749 - +0.1
1,188,754 - +0.1

Or see this region's nucleotide sequence